Nemo  2.3.56
Simulate forward-in-time genetic evolution in a spatially explicit, individual-based stochastic simulator
LCE_Selection_base Member List

This is the complete list of members for LCE_Selection_base, including all inherited members.

_base_fitnessLCE_Selection_baseprotected
_diffsLCE_Selection_baseprivate
_do_change_local_optLCE_Selection_baseprivate
_eVarianceLCE_Selection_baseprotected
_event_nameLifeCycleEventprotected
_fitnessLCE_Selection_baseprotected
_FitnessFixModelLCE_Selection_baseprivate
_FpedigreeLCE_Selection_baseprivate
_getFitnessLCE_Selection_baseprotected
_getRawFitnessLCE_Selection_baseprotected
_gsl_selection_matrixLCE_Selection_baseprivate
_ind_cntrLCE_Selection_baseprotected
_is_absoluteLCE_Selection_baseprotected
_is_localLCE_Selection_baseprotected
_LCELinkedTraitIndexLifeCycleEventprotected
_LCELinkedTraitTypeLifeCycleEventprotected
_letheqLCE_Selection_baseprotected
_local_optimaLCE_Selection_baseprivate
_max_fitnessLCE_Selection_baseprotected
_mean_fitnessLCE_Selection_baseprotected
_paramSetSimComponentprotected
_pheLCE_Selection_baseprivate
_popPtrLifeCycleEventprotected
_rate_of_change_is_stdLCE_Selection_baseprivate
_rate_of_change_local_optimaLCE_Selection_baseprivate
_res1LCE_Selection_baseprivate
_scaling_factorLCE_Selection_baseprotected
_selection_matrixLCE_Selection_baseprivate
_selection_varianceLCE_Selection_baseprotected
_SelectionModelsLCE_Selection_baseprotected
_selectTraitDimensionLCE_Selection_baseprotected
_set_std_rate_at_generationLCE_Selection_baseprivate
_setNewLocalOptimaLCE_Selection_baseprotected
_setScalingFactorLCE_Selection_baseprotected
_staterLCE_Selection_baseprotected
_std_rate_reference_patchLCE_Selection_baseprivate
_survivalLCE_Selection_baseprotected
_TraitIndicesLCE_Selection_baseprotected
_TraitsLCE_Selection_baseprotected
_writerLCE_Selection_baseprotected
add_parameter(Param *param)SimComponentinlinevirtual
add_parameter(std::string Name, param_t Type, bool isRequired, bool isBounded, double low_bnd, double up_bnd)SimComponentinlinevirtual
add_parameter(std::string Name, param_t Type, bool isRequired, bool isBounded, double low_bnd, double up_bnd, ParamUpdaterBase *updater)SimComponentinlinevirtual
addAgeClass()LCE_Selection_baseinlinevirtual
addPhenotypicSD(unsigned int deme, double *stDev)LCE_Selection_base
attach_trait(string trait)LifeCycleEventinlinevirtual
changeLocalOptima()LCE_Selection_base
clone()LCE_Selection_baseinlinevirtual
doViabilitySelection(sex_t SEX, age_idx AGE, Patch *patch, unsigned int p)LCE_Selection_base
execute()LCE_Selection_basevirtual
get_event_name()LifeCycleEventinlinevirtual
get_name()SimComponentinlinevirtual
get_parameter(std::string name)SimComponentinlinevirtual
get_parameter_value(std::string name)SimComponentinlinevirtual
get_paramset()SimComponentinlinevirtual
get_pop_ptr()LifeCycleEventinlinevirtual
get_rank()LifeCycleEventinlinevirtual
getFitness(Individual *ind, unsigned int patch)LCE_Selection_baseinline
getFitnessAbsolute(Individual *ind, unsigned int patch)LCE_Selection_base
getFitnessDirect(Individual *offsprg, unsigned int patch, unsigned int trait)LCE_Selection_baseinline
getFitnessFixedEffect(Individual *offsprg, unsigned int patch, unsigned int trait)LCE_Selection_baseinline
getFitnessMultivariateGaussian(Individual *offsprg, unsigned int patch, unsigned int trait)LCE_Selection_base
getFitnessMultivariateGaussian_VE(Individual *offsprg, unsigned int patch, unsigned int trait)LCE_Selection_base
getFitnessRelative(Individual *ind, unsigned int patch)LCE_Selection_baseinline
getFitnessUnivariateGaussian(Individual *offsprg, unsigned int patch, unsigned int trait)LCE_Selection_base
getFitnessUnivariateGaussian_VE(Individual *offsprg, unsigned int patch, unsigned int trait)LCE_Selection_base
getFitnessUnivariateQuadratic(Individual *ind, unsigned int patch, unsigned int trait)LCE_Selection_base
getMaxFitness(age_idx age)LCE_Selection_base
getMaxPatchFitness(age_idx age, unsigned int p)LCE_Selection_base
getMeanFitness(age_idx age)LCE_Selection_base
getMeanPatchFitness(age_idx age, unsigned int p)LCE_Selection_base
has_parameter(std::string name)SimComponentinlinevirtual
init(Metapop *popPtr)LifeCycleEventinlinevirtual
LCE_Breed_SelectionLCE_Selection_basefriend
LCE_Selection_base()LCE_Selection_base
LCE_SelectionFHLCE_Selection_basefriend
LCE_SelectionSHLCE_Selection_basefriend
LifeCycleEvent(const char *name, const char *trait_link)LifeCycleEventinline
loadFileServices(FileServices *loader)LCE_Selection_basevirtual
loadStatServices(StatServices *loader)LCE_Selection_basevirtual
loadUpdaters(UpdaterServices *loader)SimComponentinlinevirtual
removeAgeClass()LCE_Selection_baseinlinevirtual
requiredAgeClass()LCE_Selection_baseinlinevirtual
resetCounters()LCE_Selection_base
resetParameterFromSource(std::string param, SimComponent *cmpt)LCE_Selection_baseinlinevirtual
set_event_name(std::string &name)LifeCycleEventinlinevirtual
set_event_name(const char *name)LifeCycleEventinlinevirtual
set_fit_model()LCE_Selection_base
set_local_optima()LCE_Selection_base
set_param_rate_of_change()LCE_Selection_base
set_paramset(std::string name, bool required, SimComponent *owner)LifeCycleEventinlinevirtual
SimComponent::set_paramset(ParamSet *paramset)SimComponentinlinevirtual
set_paramsetFromCopy(const ParamSet &PSet)SimComponentinlinevirtual
set_pop_ptr(Metapop *popPtr)LifeCycleEventinlinevirtual
set_sel_model()LCE_Selection_base
set_std_rate_of_change()LCE_Selection_base
setLocalOptima()LCE_Selection_base
setMeanFitness(age_idx age)LCE_Selection_baseinline
setMeans(unsigned int tot_ind)LCE_Selection_base
setParameters()LCE_Selection_basevirtual
setScalingFactorAbsolute(age_idx age, unsigned int p)LCE_Selection_baseinline
setScalingFactorGlobal(age_idx age, unsigned int p)LCE_Selection_base
setScalingFactorLocal(age_idx age, unsigned int p)LCE_Selection_base
setScalingFactorMaxGlobal(age_idx age, unsigned int p)LCE_Selection_base
setScalingFactorMaxLocal(age_idx age, unsigned int p)LCE_Selection_base
setSelectionMatrix()LCE_Selection_base
SimComponent()SimComponentinline
~LCE_Selection_base()LCE_Selection_basevirtual
~LifeCycleEvent()LifeCycleEventinlinevirtual
~SimComponent()SimComponentinlinevirtual

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